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Journals
Written by Ofure Obazee April 11, 2016 491 0
BMC Bioinformatics is an open access, peer-reviewed journal that considers articles on all aspects of the development, testing and novel application of computational and statistical methods for the modeling...
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Databases
Written by Kim Gurwitz April 08, 2016 390 0
"A curated, searchable portal of inter-related data standards, databases, and policies in the life, environmental and biomedical sciences" - from the website. Aimed at - researchers, curators, database developers, funders,...
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Software
Written by Kim Gurwitz April 08, 2016 498 0
*Interpret next generation sequencing results *Identify & Prioritize genes and variants according to their relevance to diseases and phenotypes of interest *Explore relationships between genes and gene variants and selected...
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Software
Written by Kim Gurwitz April 08, 2016 457 0
"HUMAnN is a pipeline for efficiently and accurately profiling the presence/absence and abundance of microbial pathways in a community from metagenomic or metatranscriptomic sequencing data." - from the website. ...
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Software
Written by Kim Gurwitz April 08, 2016 821 0
"a computational tool for profiling the composition of microbial communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun sequencing data with species level resolution." - from the website Workflow available...
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Software
Written by Kim Gurwitz April 08, 2016 721 0
"LDA Effect Size (LEfSe) (Segata et. al 2010) is an algorithm for high-dimensional biomarker discovery and explanation that identifies genomic features (genes, pathways, or taxa) characterizing the differences between two...
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Databases
Written by Kim Gurwitz April 08, 2016 571 0
catalog of characterised clade-specific microbial genes.
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openSNP
Hot
Databases
Written by Kim Gurwitz April 08, 2016 1294 0
"openSNP allows customers of direct-to-customer genetic tests to publish their test results, find others with similar genetic variations, learn more about their results by getting the latest primary literature on...
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Software
Written by Kim Gurwitz April 01, 2016 470 0
"eXtasy is a pipeline for ranking nonsynonymous single nucleotide variants given a specific phenotype" - from the eXtasy website.
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Software
Written by Kim Gurwitz April 01, 2016 405 0
"Candidate genes prioritization through genomic data fusion" - from the Endeavour website
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DISCLAIMER: The eGenomics Catalogue is a community effort, developing out of the H3ABioNet consortium. The resources listed were added and reviewed by volunteers. Reviews are personal opinions and a listing or review should not be construed as an endorsement of any particular resource by the consortium. The funders do not independently verify information added to the catalogue, we rely on submitters to provide information that is accurate and not misleading.
